DIVIDING LUNG CANCER CELL. PHOTO BY ANNE WESTON, LRI, CRUK, WELLCOME IMAGES

A big part of what biologists do is to catalog the diversity of life. That diversity can take many forms. There are hundreds of thousands of species of beetles on Earth, for example. There are also some untold number of genes in the human genome that play a part in cancers of different types.

In his early years, the Nobel-Prize winning biologist James Watson infamously derided nature’s catalogers as “stamp collectors.” Simply creating lists didn’t seem to get at the heart of things–like the structure of DNA, which Watson helped decipher. But it’s impossible to fully understand nature only by taking it apart into its smallest parts. An organism is a sum of those parts, as is an ecosystem or a biosphere. Watson implicitly acknowledged that fact when he became the first director of the Human Genome Project, which sought to sequence all our genes. The catalog itself–whether it’s a catalog of plant species in a forest, or bacteria in a microbiome, or genes in a genome–doesn’t automatically reveal insights on its own. But scientists can explore a catalog to test their ideas about large-scale biology. Continue reading “How Do You Know When You’ve Found Them All? A Question That Applies To Beetles and Cancer Genes Alike”

The New York Times, February 6, 2014

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Cancer is a disease of genes gone wrong. When certain genes mutate, they make cells behave in odd ways. The cells divide swiftly, they hide from the immune system that could kill them and they gain the nourishment they need to develop into tumors.

Scientists started identifying these cancer genes in the 1970s and their list slowly grew over the years. By studying them, scientists came to understand how different types of cancer develop and in some cases they were even able to develop gene-targeting drugs. Last May, for example, the Food and Drug Administration approved a drug known as Tarceva as a first-line treatment for lung cancer in which a gene called EGFR has mutated.

Continue reading “A Catalog of Cancer Genes That’s Done, or Just a Start”

FIRECROWN HUMMINGBIRD NEST. COPYRIGHT FELIPE OSORIO-ZUÑIGA

When we think of a nest, we think simply of a natural piece of construction. A bird gathers together twigs and stems and leaves and assembles them into a shelter for its eggs. We don’t think much about the plants it uses. They’re just building material.

But in at least some cases, there may be more to a nest than meets the eye. It may be a cooperative breeding project, produced by two partners–animals and plants. Continue reading “A Living Nest?”

COPYRIGHT: NEANDERTHAL MUSEUM/H. NEUMANN

For my new “Matter” column in the New York Times, I look at the latest advance in our understanding of Neanderthal DNA. Neanderthals and humans interbred about 40,000 years ago, and their DNA is still in human genomes today. Scientists are mapping those Neanderthal genes we carry, and figuring out which ones have benefited us and which have made us sick.

One thing I didn’t have room to discuss is a question that I keep asking and to which scientists always respond with intriguingly noncommittal answers: Are Neanderthals members of our own species? Are they Homo sapiens? Are they a subspecies–Homo sapiens neanderthalensis? Or are they a separate species–Homo neanderthalensis? Continue reading “Neanderthals: Intimate Strangers”

The New York Times, January 29, 2014

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Ever since the discovery in 2010 that Neanderthals interbred with the ancestors of living humans, scientists have been trying to determine how their DNA affects people today. Now two new studies have traced the history of Neanderthal DNA, and have pinpointed a number of genes that may have medical importance today.

Among the findings, the studies have found clues to the evolution of skin and fertility, as well as susceptibility to diseases like diabetes. More broadly, they show how the legacy of Neanderthals has endured 30,000 years after their extinction.

“It’s something that everyone wanted to know,” said Laurent Excoffier, a geneticist at the University of Bern in Switzerland who was not involved in the research.

Continue reading “Neanderthals Leave Their Mark on Us”